PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS68388.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 347aa    MW: 36677.7 Da    PI: 4.751
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS68388.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.34.9e-12193238555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h+++Er RR+ri +++  L++l+P+a      K +Ka++L + +eY+k Lq
  EPS68388.1 193 HSIAERLRRERIAERMKALQKLVPNA-----NKTDKASMLDEIIEYVKFLQ 238
                 99***********************8.....6******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.62E-16186246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.199188237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-16190244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.02E-12192240No hitNo description
PfamPF000102.2E-9193238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-12194243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048767Biological Processroot hair elongation
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MGQYDGDNEF PATSAIDLLL NLHQIQSLHQ DMQQSQMLSS SEFDPAAAAA ASQDDFIEQM  60
LSSDPAAFPW ADGQQAAGIL EEPPPPQANS LTMLQHQFCN EWIDGNDAGE GASFASANLT  120
DDGSMAVKAL FDGFHGSIAE NSLPSQHYHH AQVLQTQNHG GAQPLAAAPS PTTAPPRQRV  180
RVRARRGQAT DPHSIAERLR RERIAERMKA LQKLVPNANK TDKASMLDEI IEYVKFLQLQ  240
AKVLSVTRLG GGAAHESLEG GVVTTASSSS SNDGGGLAAM EQQVAKLMDE DIGAAMQYLQ  300
GKGLCLVPVS LAAAVSHQKA EDAGPSSPTA SAMTLQSAKD AAGNSDK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197202RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084002.11e-102PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH69-like
SwissprotQ9ZUG99e-67BH066_ARATH; Transcription factor bHLH66
TrEMBLS8DYN80.0S8DYN8_9LAMI; Uncharacterized protein
STRINGGLYMA17G08300.26e-75(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37592445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.13e-43LJRHL1-like 1
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]